Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tobe domain-containing protein | SHEW_RS17270 | Not Available | Positive | 3982084 - 3982293 | 7246.93 |
| gfa family protein | SHEW_RS17275 | Not Available | Negative | 3982465 - 3982839 | 14030.6 |
| hypothetical protein | SHEW_RS20865 | Not Available | Negative | 3982945 - 3983100 | 5967.78 |
| tonb-dependent receptor | SHEW_RS17285 | Not Available | Positive | 3983615 - 3985672 | 75623.6 |
| sensor domain-containing diguanylate cyclase | SHEW_RS17290 | Not Available | Negative | 3985748 - 3986728 | 36622.8 |
| response regulator transcription factor | SHEW_RS17295 | Not Available | Negative | 3986929 - 3987465 | 19560.0 |
| sensor histidine kinase | SHEW_RS17300 | Not Available | Negative | 3987462 - 3988649 | 42864.6 |
| dtdp-4-dehydrorhamnose reductase family protein | SHEW_RS17305 | Not Available | Negative | 3988719 - 3989642 | 33887.7 |
| lipid kinase yegs | SHEW_RS17310 | Not Available | Negative | 3989642 - 3990565 | 32767.9 |
| mlic family protein | SHEW_RS17315 | Not Available | Positive | 3990767 - 3991450 | 24897.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
