Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | SHEW_RS17120 | Not Available | Positive | 3950185 - 3950730 | 19892.7 |
| lps export abc transporter atp-binding protein | SHEW_RS17125 | Not Available | Positive | 3950727 - 3951458 | 27010.7 |
| rna polymerase factor sigma-54 | SHEW_RS17130 | Not Available | Positive | 3951593 - 3953080 | 55727.9 |
| ribosome hibernation promoting factor | SHEW_RS17135 | Not Available | Positive | 3953111 - 3953398 | 11126.4 |
| pts iia-like nitrogen regulatory protein ptsn | SHEW_RS17140 | Not Available | Positive | 3953401 - 3953844 | 16023.5 |
| rnase adapter rapz | SHEW_RS17145 | Not Available | Positive | 3953841 - 3954689 | 32464.3 |
| hpr family phosphocarrier protein | SHEW_RS17150 | Not Available | Positive | 3954682 - 3954957 | 9444.59 |
| magnesium transporter | SHEW_RS17155 | Not Available | Positive | 3955058 - 3956425 | 49579.2 |
| response regulator transcription factor | SHEW_RS17160 | Not Available | Positive | 3956530 - 3957213 | 25337.6 |
| sensor histidine kinase | SHEW_RS17165 | Not Available | Positive | 3957225 - 3958487 | 46695.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
