Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | SHEW_RS17025 | Not Available | Negative | 3934127 - 3934693 | 21430.8 |
| adenylosuccinate synthase | SHEW_RS17030 | Not Available | Negative | 3935074 - 3936369 | 46863.4 |
| duf2065 domain-containing protein | SHEW_RS17035 | Not Available | Negative | 3936436 - 3936624 | 6908.88 |
| 30s ribosomal protein s9 | SHEW_RS17040 | Not Available | Negative | 3936731 - 3937123 | 14580.9 |
| 50s ribosomal protein l13 | SHEW_RS17045 | Not Available | Negative | 3937139 - 3937570 | 15923.3 |
| cell division protein zape | SHEW_RS17050 | Not Available | Negative | 3937844 - 3938950 | 42193.7 |
| do family serine endopeptidase degq | SHEW_RS17055 | Not Available | Positive | 3939261 - 3940613 | 46629.4 |
| outer membrane-stress sensor serine endopeptidase degs | SHEW_RS17060 | Not Available | Positive | 3940751 - 3941830 | 37712.7 |
| hypothetical protein | SHEW_RS20860 | Not Available | Negative | 3941950 - 3942108 | 5516.24 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SHEW_RS17065 | Not Available | Negative | 3942260 - 3943519 | 44522.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
