Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retention module-containing protein | SHEW_RS01640 | Not Available | Negative | 355622 - 360277 | 161423.0 |
| heme biosynthesis hemy n-terminal domain-containing protein | SHEW_RS01645 | Not Available | Negative | 360568 - 361734 | 44088.5 |
| uroporphyrinogen-iii c-methyltransferase | SHEW_RS01650 | Not Available | Negative | 361731 - 362873 | 42932.8 |
| uroporphyrinogen-iii synthase | SHEW_RS01655 | Not Available | Negative | 362929 - 363660 | 26798.1 |
| hydroxymethylbilane synthase | SHEW_RS01660 | Not Available | Negative | 363663 - 364592 | 33266.2 |
| class i adenylate cyclase | SHEW_RS01665 | Not Available | Positive | 364802 - 367222 | 92928.8 |
| iron donor protein cyay | SHEW_RS01670 | Not Available | Negative | 367230 - 367562 | 12383.5 |
| lps translocon maturation chaperone lptm | SHEW_RS20285 | Not Available | Positive | 368106 - 368261 | 5480.53 |
| diaminopimelate decarboxylase | SHEW_RS01675 | Not Available | Positive | 368267 - 369511 | 44984.9 |
| diaminopimelate epimerase | SHEW_RS01680 | Not Available | Positive | 369549 - 370388 | 30659.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
