Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-2 protease family protein | SHEW_RS16720 | Not Available | Positive | 3858021 - 3859121 | 40478.1 |
| crp/fnr family transcriptional regulator | SHEW_RS16725 | Not Available | Positive | 3859531 - 3860301 | 28278.4 |
| lamg domain-containing protein | SHEW_RS16730 | Not Available | Negative | 3860426 - 3861277 | 31256.4 |
| atp-binding protein | SHEW_RS20165 | Not Available | Negative | 3861274 - 3862692 | 52765.7 |
| hypothetical protein | SHEW_RS16740 | Not Available | Negative | 3862928 - 3863353 | 15117.4 |
| calx-beta domain-containing protein | SHEW_RS20170 | Not Available | Negative | 3863407 - 3867945 | 161807.0 |
| hypothetical protein | SHEW_RS16755 | Not Available | Negative | 3868128 - 3868778 | 23715.9 |
| calx-beta domain-containing protein | SHEW_RS20175 | Not Available | Negative | 3868848 - 3873455 | 166398.0 |
| response regulator transcription factor | SHEW_RS16765 | Not Available | Negative | 3873857 - 3874480 | 23619.0 |
| tonb-dependent receptor plug domain-containing protein | SHEW_RS16775 | Not Available | Positive | 3874687 - 3876579 | 69889.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
