Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt family zinc-dependent metalloprotease | SHEW_RS16670 | Not Available | Positive | 3845775 - 3846386 | 23270.9 |
| endonuclease | SHEW_RS16675 | Not Available | Positive | 3846583 - 3847317 | 27826.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | SHEW_RS16680 | Not Available | Positive | 3847321 - 3848052 | 26878.4 |
| glutathione synthase | SHEW_RS16685 | Not Available | Positive | 3848091 - 3849038 | 34915.3 |
| is66 family transposase | SHEW_RS16690 | Not Available | Positive | 3849051 - 3850367 | 47311.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SHEW_RS16695 | Not Available | Negative | 3850736 - 3853213 | 92059.1 |
| hypothetical protein | SHEW_RS16700 | Not Available | Negative | 3853218 - 3854414 | 44741.3 |
| hypothetical protein | SHEW_RS16705 | Not Available | Negative | 3854398 - 3854838 | 16219.6 |
| class i sam-dependent methyltransferase | SHEW_RS16710 | Not Available | Positive | 3855021 - 3856049 | 37553.2 |
| duf342 domain-containing protein | SHEW_RS16715 | Not Available | Positive | 3856235 - 3857905 | 60680.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
