Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | SHEW_RS16520 | Not Available | Negative | 3801234 - 3801683 | 15977.4 |
| extracellular exonuclease exem | SHEW_RS16525 | Not Available | Negative | 3802344 - 3804959 | 93708.6 |
| helix-turn-helix transcriptional regulator | SHEW_RS16530 | Not Available | Negative | 3805624 - 3806286 | 24967.4 |
| duf2238 domain-containing protein | SHEW_RS16535 | Not Available | Negative | 3806545 - 3807150 | 22716.0 |
| phosphoglycerate dehydrogenase | SHEW_RS16540 | Not Available | Positive | 3807583 - 3808812 | 44261.4 |
| duf3592 domain-containing protein | SHEW_RS16545 | Not Available | Positive | 3809020 - 3809496 | 17941.7 |
| pp_03232 | SHEW_RS16550 | Not Available | Positive | 3809680 - 3810648 | Not Available |
| two-component system response regulator | SHEW_RS16555 | Not Available | Negative | 3810776 - 3811795 | 37966.8 |
| pas domain s-box protein | SHEW_RS16560 | Not Available | Negative | 3812011 - 3817317 | 196588.0 |
| abc transporter atp-binding protein | SHEW_RS16565 | Not Available | Positive | 3817906 - 3818571 | 24392.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
