Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate--2-oxoglutarate transaminase | SHEW_RS16420 | Not Available | Negative | 3775635 - 3776915 | 45165.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | SHEW_RS16425 | Not Available | Negative | 3776933 - 3778390 | 51478.9 |
| lysr family transcriptional regulator | SHEW_RS16430 | Not Available | Positive | 3778538 - 3779500 | 35874.3 |
| oprd family outer membrane porin | SHEW_RS16435 | Not Available | Negative | 3779695 - 3780924 | 45764.5 |
| fadr/gntr family transcriptional regulator | SHEW_RS16440 | Not Available | Positive | 3781333 - 3782049 | 26554.8 |
| duf3087 family protein | SHEW_RS16445 | Not Available | Negative | 3782100 - 3782624 | 19867.2 |
| na+/h+ antiporter nhac family protein | SHEW_RS16450 | Not Available | Positive | 3783257 - 3784588 | 46235.6 |
| duf998 domain-containing protein | SHEW_RS16455 | Not Available | Positive | 3784819 - 3785520 | 25489.9 |
| 23s rrna pseudouridine(2604) synthase rluf | SHEW_RS16460 | Not Available | Positive | 3785529 - 3786245 | 26783.4 |
| fad-binding protein | SHEW_RS16465 | Not Available | Positive | 3786798 - 3788465 | 60253.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
