Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | SHEW_RS16370 | Not Available | Positive | 3762993 - 3766559 | 133956.0 |
| diguanylate cyclase domain-containing protein | SHEW_RS16375 | Not Available | Positive | 3766819 - 3767886 | 40064.2 |
| amino acid abc transporter atp-binding protein | SHEW_RS16380 | Not Available | Negative | 3767947 - 3768672 | 26182.0 |
| amino acid abc transporter permease | SHEW_RS16385 | Not Available | Negative | 3768665 - 3769345 | 24670.9 |
| basic amino acid abc transporter substrate-binding protein | SHEW_RS16390 | Not Available | Negative | 3769352 - 3770080 | 26253.6 |
| hypothetical protein | SHEW_RS16395 | Not Available | Positive | 3770609 - 3770854 | 9021.16 |
| oxidative stress defense protein | SHEW_RS16400 | Not Available | Positive | 3771371 - 3772087 | 26015.2 |
| wd40 repeat domain-containing protein | SHEW_RS16405 | Not Available | Positive | 3772275 - 3773273 | 37194.2 |
| potassium/proton antiporter | SHEW_RS16410 | Not Available | Negative | 3773303 - 3774493 | 42183.1 |
| prolipoprotein diacylglyceryl transferase | SHEW_RS16415 | Not Available | Negative | 3774643 - 3775407 | 28629.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
