Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 332103 - 332178 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 332263 - 332339 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 332392 - 332468 | Not Available |
| eal domain-containing protein | SHEW_RS01605 | Not Available | Negative | 332601 - 334523 | 73462.0 |
| transglutaminase-like cysteine peptidase | SHEW_RS01610 | Not Available | Negative | 334532 - 335239 | 26918.6 |
| ompa family protein | SHEW_RS01615 | Not Available | Negative | 335256 - 335861 | 22577.8 |
| tolc family outer membrane protein | SHEW_RS01620 | Not Available | Negative | 335861 - 337273 | 52506.6 |
| hlyd family type i secretion periplasmic adaptor subunit | SHEW_RS01625 | Not Available | Negative | 337305 - 338687 | 51702.2 |
| type i secretion system permease/atpase | SHEW_RS01630 | Not Available | Negative | 338680 - 340860 | 79295.0 |
| retention module-containing protein | SHEW_RS20635 | Not Available | Negative | 340995 - 355382 | 493324.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
