Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | SHEW_RS16170 | Not Available | Positive | 3718384 - 3718914 | 19558.9 |
| aminopeptidase pepb | SHEW_RS16175 | Not Available | Negative | 3718956 - 3720233 | 44897.3 |
| dna/rna nuclease sfsa | SHEW_RS16180 | Not Available | Positive | 3720572 - 3721276 | 26117.3 |
| rna polymerase-binding protein dksa | SHEW_RS16185 | Not Available | Positive | 3721436 - 3721879 | 16810.0 |
| trna glutamyl-q(34) synthetase gluqrs | SHEW_RS16190 | Not Available | Positive | 3722008 - 3722889 | 32269.7 |
| polynucleotide adenylyltransferase pcnb | SHEW_RS16195 | Not Available | Positive | 3722971 - 3724413 | 54793.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SHEW_RS16200 | Not Available | Positive | 3724413 - 3724901 | 17823.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SHEW_RS16205 | Not Available | Positive | 3724997 - 3725791 | 28227.1 |
| pantoate--beta-alanine ligase | SHEW_RS16210 | Not Available | Positive | 3725808 - 3726656 | 30923.2 |
| hypothetical protein | SHEW_RS16215 | Not Available | Negative | 3726785 - 3727006 | 8370.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
