Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane dipeptidase | SHEW_RS16070 | Not Available | Positive | 3686903 - 3688060 | 42127.2 |
| hypothetical protein | SHEW_RS16080 | Not Available | Negative | 3688582 - 3689193 | 23423.9 |
| hypothetical protein | SHEW_RS16085 | Not Available | Negative | 3689318 - 3689875 | 21032.2 |
| dmt family transporter | SHEW_RS16090 | Not Available | Positive | 3690445 - 3691314 | 29863.3 |
| hypothetical protein | SHEW_RS20445 | Not Available | Negative | 3691659 - 3691868 | 8000.06 |
| nad-dependent epimerase/dehydratase family protein | SHEW_RS16095 | Not Available | Negative | 3691980 - 3692861 | 32354.0 |
| flavocytochrome c | SHEW_RS16100 | Not Available | Negative | 3693260 - 3695050 | 63348.2 |
| atp-binding protein | SHEW_RS16105 | Not Available | Positive | 3695449 - 3697413 | 73158.3 |
| sigma-54-dependent transcriptional regulator | SHEW_RS16110 | Not Available | Positive | 3697423 - 3698811 | 51301.8 |
| dicarboxylate/amino acid:cation symporter | SHEW_RS16115 | Not Available | Negative | 3698873 - 3700135 | 44342.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
