Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s10 family peptidase | SHEW_RS15920 | Not Available | Negative | 3650646 - 3652247 | 59452.1 |
| ppx/gppa phosphatase family protein | SHEW_RS15925 | Not Available | Negative | 3652393 - 3653901 | 56149.9 |
| polyphosphate kinase 1 | SHEW_RS15930 | Not Available | Negative | 3653958 - 3656093 | 81782.0 |
| thioredoxin family protein | SHEW_RS15935 | Not Available | Positive | 3656458 - 3656997 | 19685.1 |
| tonb-dependent receptor plug domain-containing protein | SHEW_RS15940 | Not Available | Negative | 3657178 - 3659754 | 92708.8 |
| sigma-54 interaction domain-containing protein | SHEW_RS15945 | Not Available | Positive | 3660367 - 3661815 | 54158.0 |
| cytochrome c oxidase accessory protein ccog | SHEW_RS15950 | Not Available | Positive | 3661997 - 3663439 | 54723.0 |
| amp-binding protein | SHEW_RS15955 | Not Available | Positive | 3663756 - 3665351 | 57805.4 |
| lipocalin family protein | SHEW_RS15960 | Not Available | Negative | 3665501 - 3666013 | 19400.9 |
| duf4382 domain-containing protein | SHEW_RS15965 | Not Available | Positive | 3666372 - 3667352 | 35636.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
