Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | SHEW_RS15875 | Not Available | Positive | 3644074 - 3644382 | 11459.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3644460 - 3644640 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | SHEW_RS15880 | Not Available | Positive | 3644976 - 3645587 | 23155.8 |
| substrate-binding periplasmic protein | SHEW_RS15885 | Not Available | Negative | 3645607 - 3646428 | 30804.9 |
| copper resistance protein nlpe | SHEW_RS15890 | Not Available | Positive | 3646825 - 3647334 | 18358.9 |
| cold-shock protein, dna-binding | SHEW_RS15895 | Not Available | Negative | 3647350 - 3647943 | 22281.5 |
| uracil-dna glycosylase | SHEW_RS15900 | Not Available | Negative | 3648126 - 3648794 | 24843.5 |
| type ii secretion system protein | SHEW_RS15905 | Not Available | Positive | 3648928 - 3649464 | 19345.4 |
| duf3144 domain-containing protein | SHEW_RS15910 | Not Available | Positive | 3649584 - 3649901 | 11678.5 |
| lyse family translocator | SHEW_RS15915 | Not Available | Negative | 3650010 - 3650624 | 21604.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
