Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | SHEW_RS01540 | Not Available | Negative | 319961 - 321097 | 42061.0 |
| tetr/acrr family transcriptional regulator | SHEW_RS01545 | Not Available | Positive | 321214 - 321822 | 22589.5 |
| sodium-dependent transporter | SHEW_RS01550 | Not Available | Negative | 321953 - 323311 | 48649.9 |
| lrp/asnc family transcriptional regulator | SHEW_RS01555 | Not Available | Negative | 323549 - 324049 | 18306.2 |
| phosphatase pap2 family protein | SHEW_RS01560 | Not Available | Negative | 324124 - 324891 | 27989.0 |
| cell envelope integrity protein cred | SHEW_RS01565 | Not Available | Negative | 324998 - 326350 | 49798.8 |
| ubiquinone biosynthesis accessory factor ubik | SHEW_RS01570 | Not Available | Negative | 326573 - 326833 | 9904.9 |
| dna helicase rep | SHEW_RS01575 | Not Available | Positive | 327074 - 329086 | 77151.9 |
| diguanylate cyclase domain-containing protein | SHEW_RS01580 | Not Available | Negative | 329116 - 331764 | 99825.1 |
| Trna-arg | Not Available | Not Available | Positive | 331983 - 332059 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
