Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase ppic | SHEW_RS15570 | Not Available | Positive | 3571739 - 3572017 | 10203.7 |
| is110-like element isslo1 family transposase | SHEW_RS15575 | Not Available | Negative | 3572454 - 3573467 | 37938.3 |
| duf4344 domain-containing metallopeptidase | SHEW_RS15580 | Not Available | Positive | 3573858 - 3574649 | 28968.9 |
| magnesium transporter | SHEW_RS15585 | Not Available | Positive | 3574936 - 3576291 | 48724.1 |
| mechanosensitive ion channel family protein | SHEW_RS15590 | Not Available | Negative | 3576298 - 3577191 | 33245.7 |
| hypothetical protein | SHEW_RS20855 | Not Available | Positive | 3577795 - 3577971 | 6433.82 |
| sodium/proline symporter putp | SHEW_RS15595 | Not Available | Positive | 3577976 - 3579472 | 53587.1 |
| glutamate 5-kinase | SHEW_RS15600 | Not Available | Positive | 3579485 - 3580585 | 39485.9 |
| glutamate-5-semialdehyde dehydrogenase | SHEW_RS15605 | Not Available | Positive | 3580588 - 3581835 | 44905.3 |
| pyrroline-5-carboxylate reductase | SHEW_RS15610 | Not Available | Positive | 3581859 - 3582716 | 30218.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
