Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | SHEW_RS15520 | Not Available | Positive | 3558692 - 3559504 | 29961.3 |
| hypothetical protein | SHEW_RS15525 | Not Available | Positive | 3559546 - 3559812 | 9719.11 |
| ggdef domain-containing protein | SHEW_RS15530 | Not Available | Positive | 3559883 - 3561589 | 63663.8 |
| cation:dicarboxylate symporter family transporter | SHEW_RS15535 | Not Available | Positive | 3561763 - 3563940 | 79774.9 |
| clca_x family protein | SHEW_RS15540 | Not Available | Negative | 3563943 - 3564725 | 29226.9 |
| acyl-coa dehydrogenase | SHEW_RS15545 | Not Available | Negative | 3564950 - 3567184 | 81425.5 |
| (fe-s)-binding protein | SHEW_RS15550 | Not Available | Positive | 3567633 - 3568376 | 26727.6 |
| lactate utilization protein b | SHEW_RS15555 | Not Available | Positive | 3568387 - 3569775 | 50916.5 |
| lutc/ykgg family protein | SHEW_RS15560 | Not Available | Positive | 3569777 - 3570346 | 19939.9 |
| lysr family transcriptional regulator | SHEW_RS15565 | Not Available | Negative | 3570632 - 3571525 | 33023.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
