Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | SHEW_RS15420 | Not Available | Negative | 3532681 - 3533511 | 30354.5 |
| trna epoxyqueuosine(34) reductase queg | SHEW_RS15425 | Not Available | Positive | 3533864 - 3535027 | 43687.5 |
| dodecin | SHEW_RS15430 | Not Available | Negative | 3535238 - 3535441 | 7412.86 |
| alkyl/aryl-sulfatase | SHEW_RS15435 | Not Available | Negative | 3535567 - 3537531 | 72832.9 |
| gmc family oxidoreductase | SHEW_RS15440 | Not Available | Negative | 3537658 - 3539376 | 62780.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | SHEW_RS15445 | Not Available | Negative | 3539414 - 3540016 | 22780.9 |
| glutamate synthase-related protein | SHEW_RS15450 | Not Available | Positive | 3540273 - 3541823 | 55138.1 |
| tetratricopeptide repeat protein | SHEW_RS15455 | Not Available | Positive | 3542173 - 3543687 | 56525.3 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | SHEW_RS15460 | Not Available | Negative | 3543846 - 3546125 | 84775.3 |
| lysr family transcriptional regulator | SHEW_RS15465 | Not Available | Positive | 3546326 - 3547225 | 33321.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
