Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | SHEW_RS15370 | Not Available | Positive | 3522536 - 3523171 | 23823.8 |
| hypothetical protein | SHEW_RS15375 | Not Available | Negative | 3523288 - 3523896 | 22898.3 |
| duf4447 family protein | SHEW_RS15380 | Not Available | Negative | 3524043 - 3524543 | 18730.5 |
| smi1/knr4 family protein | SHEW_RS15385 | Not Available | Negative | 3524580 - 3524981 | 15417.1 |
| rela/spot domain-containing protein | SHEW_RS15390 | Not Available | Negative | 3525343 - 3526125 | 29160.7 |
| m13 family metallopeptidase | SHEW_RS15395 | Not Available | Negative | 3526276 - 3528360 | 78187.1 |
| sugar o-acetyltransferase | SHEW_RS15400 | Not Available | Negative | 3528561 - 3529103 | 19613.5 |
| 16s rrna pseudouridine(516) synthase rsua | SHEW_RS15405 | Not Available | Positive | 3529285 - 3529977 | 25425.5 |
| duf3069 domain-containing protein | SHEW_RS15410 | Not Available | Negative | 3529992 - 3530429 | 16003.9 |
| ggdef domain-containing protein | SHEW_RS15415 | Not Available | Positive | 3530793 - 3532616 | 68635.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
