Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | SHEW_RS15270 | Not Available | Negative | 3494852 - 3495571 | 26215.2 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | SHEW_RS15275 | Not Available | Negative | 3495571 - 3496542 | 36122.6 |
| outer membrane protein assembly factor bamd | SHEW_RS15280 | Not Available | Positive | 3496666 - 3497424 | 28747.3 |
| Trna-phe | Not Available | Not Available | Positive | 3497824 - 3497899 | Not Available |
| methyl-accepting chemotaxis protein | SHEW_RS15290 | Not Available | Positive | 3498055 - 3499680 | 58697.8 |
| diguanylate cyclase | SHEW_RS15295 | Not Available | Negative | 3499682 - 3501262 | 59404.7 |
| methyl-accepting chemotaxis protein | SHEW_RS15300 | Not Available | Negative | 3501394 - 3503256 | 67991.2 |
| ornithine cyclodeaminase family protein | SHEW_RS15305 | Not Available | Positive | 3503518 - 3504462 | 33716.1 |
| rna polymerase sigma factor | SHEW_RS15310 | Not Available | Positive | 3504734 - 3505306 | 21926.3 |
| hypothetical protein | SHEW_RS15315 | Not Available | Positive | 3505306 - 3505818 | 19386.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
