Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | SHEW_RS15170 | Not Available | Positive | 3472911 - 3473240 | 12310.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SHEW_RS15175 | Not Available | Positive | 3473240 - 3473710 | 17492.2 |
| penicillin-binding protein 2 | SHEW_RS15180 | Not Available | Positive | 3473788 - 3475671 | 70589.4 |
| rod shape-determining protein roda | SHEW_RS15185 | Not Available | Positive | 3475658 - 3476764 | 40760.4 |
| lytic murein transglycosylase b | SHEW_RS15190 | Not Available | Positive | 3476776 - 3477783 | 37587.7 |
| septal ring lytic transglycosylase rlpa family protein | SHEW_RS15195 | Not Available | Positive | 3477764 - 3478561 | 29445.1 |
| serine hydrolase | SHEW_RS15200 | Not Available | Positive | 3478697 - 3479869 | 43190.3 |
| duf493 family protein ybed | SHEW_RS15205 | Not Available | Positive | 3480004 - 3480270 | 9769.79 |
| lipoyl(octanoyl) transferase lipb | SHEW_RS15210 | Not Available | Positive | 3480366 - 3481016 | 24313.2 |
| lipoyl synthase | SHEW_RS15215 | Not Available | Positive | 3481018 - 3481983 | 36452.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
