Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ampg family muropeptide mfs transporter | SHEW_RS14925 | Not Available | Positive | 3430301 - 3431719 | 51754.7 |
| yajq family cyclic di-gmp-binding protein | SHEW_RS14930 | Not Available | Negative | 3431832 - 3432317 | 18228.7 |
| vanz family protein | SHEW_RS14935 | Not Available | Positive | 3432475 - 3432855 | 14342.9 |
| ketopantoate reductase family protein | SHEW_RS14940 | Not Available | Positive | 3432852 - 3433772 | 32967.9 |
| sodium-dependent transporter | SHEW_RS14945 | Not Available | Positive | 3433919 - 3435430 | 55396.9 |
| mets family nss transporter small subunit | SHEW_RS20740 | Not Available | Positive | 3435427 - 3435543 | 4135.19 |
| lysr family transcriptional regulator | SHEW_RS14950 | Not Available | Negative | 3435587 - 3436471 | 33264.0 |
| duf413 domain-containing protein | SHEW_RS14955 | Not Available | Positive | 3436624 - 3436983 | 13926.2 |
| glutathione synthase | SHEW_RS14960 | Not Available | Positive | 3436987 - 3438021 | 38509.4 |
| flavohemoglobin expression-modulating qegla motif protein | SHEW_RS14965 | Not Available | Positive | 3438008 - 3439999 | 75580.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
