Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bola family protein | SHEW_RS14880 | Not Available | Negative | 3423038 - 3423337 | 11017.0 |
| act domain-containing protein | SHEW_RS14885 | Not Available | Negative | 3423463 - 3423966 | 18269.0 |
| alpha-ketoglutarate-dependent dioxygenase alkb family protein | SHEW_RS14890 | Not Available | Negative | 3424096 - 3424743 | 24501.0 |
| hypothetical protein | SHEW_RS21040 | Not Available | Positive | 3425140 - 3425190 | 1563.88 |
| class i sam-dependent methyltransferase | SHEW_RS14895 | Not Available | Positive | 3425202 - 3426059 | 31633.1 |
| sterol desaturase family protein | SHEW_RS14900 | Not Available | Negative | 3426234 - 3427148 | 34986.4 |
| duf2804 domain-containing protein | SHEW_RS14905 | Not Available | Negative | 3427212 - 3428264 | 39313.7 |
| yajg family lipoprotein | SHEW_RS14910 | Not Available | Positive | 3428466 - 3429032 | 20729.7 |
| peptidylprolyl isomerase | SHEW_RS14915 | Not Available | Positive | 3429052 - 3429636 | 21557.1 |
| hypothetical protein | SHEW_RS14920 | Not Available | Positive | 3429823 - 3430155 | 12862.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
