Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | SHEW_RS14630 | Not Available | Negative | 3358047 - 3358832 | 28041.8 |
| atp-dependent zinc metalloprotease ftsh | SHEW_RS14635 | Not Available | Negative | 3358989 - 3360956 | 71627.9 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | SHEW_RS14640 | Not Available | Negative | 3361002 - 3361631 | 23125.0 |
| ribosome assembly rna-binding protein yhby | SHEW_RS14645 | Not Available | Positive | 3361723 - 3362022 | 10845.4 |
| transcription elongation factor grea | SHEW_RS14650 | Not Available | Negative | 3362099 - 3362575 | 17472.8 |
| carbamoyl-phosphate synthase large subunit | SHEW_RS14655 | Not Available | Negative | 3362872 - 3366093 | 117905.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SHEW_RS14660 | Not Available | Negative | 3366114 - 3367286 | 42033.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SHEW_RS14665 | Not Available | Negative | 3367447 - 3368262 | 29061.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEW_RS14670 | Not Available | Negative | 3368359 - 3368976 | 22090.7 |
| m48 family metallopeptidase | SHEW_RS14675 | Not Available | Negative | 3369057 - 3369845 | 28095.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
