Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide 5'-monophosphate nucleosidase ppnn | SHEW_RS14230 | Not Available | Positive | 3259149 - 3260501 | 50464.8 |
| flap endonuclease xni | SHEW_RS14235 | Not Available | Positive | 3260520 - 3261290 | 28446.4 |
| duf3192 domain-containing protein | SHEW_RS14240 | Not Available | Positive | 3261443 - 3261829 | 14422.0 |
| methyltransferase family protein | SHEW_RS14245 | Not Available | Negative | 3261853 - 3262323 | 17484.8 |
| alpha/beta hydrolase family protein | SHEW_RS14250 | Not Available | Negative | 3262457 - 3265270 | 105267.0 |
| isocitrate dehydrogenase | SHEW_RS14255 | Not Available | Positive | 3265570 - 3266577 | 35912.3 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | SHEW_RS14260 | Not Available | Negative | 3266754 - 3267845 | 41117.6 |
| duf423 domain-containing protein | SHEW_RS14265 | Not Available | Negative | 3267937 - 3268326 | 14299.8 |
| alpha/beta family hydrolase | SHEW_RS14270 | Not Available | Negative | 3268319 - 3269041 | 25946.5 |
| transcriptional regulator gcva | SHEW_RS14275 | Not Available | Negative | 3269102 - 3270013 | 33809.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
