Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | SHEW_RS14145 | Not Available | Negative | 3234151 - 3234939 | 29568.0 |
| carboxymuconolactone decarboxylase family protein | SHEW_RS14150 | Not Available | Negative | 3234978 - 3235421 | 16520.1 |
| hypothetical protein | SHEW_RS20720 | Not Available | Negative | 3235589 - 3235804 | 7577.01 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SHEW_RS14155 | Not Available | Positive | 3235811 - 3237238 | 52218.9 |
| hypothetical protein | SHEW_RS20850 | Not Available | Positive | 3237541 - 3237711 | 7113.99 |
| yfaz family outer membrane protein | SHEW_RS14160 | Not Available | Negative | 3237800 - 3238333 | 19205.4 |
| glutathione peroxidase | SHEW_RS14165 | Not Available | Positive | 3238632 - 3239120 | 18091.6 |
| m1 family metallopeptidase | SHEW_RS14170 | Not Available | Negative | 3240013 - 3241833 | 68604.5 |
| collagenase | SHEW_RS14175 | Not Available | Positive | 3242067 - 3242948 | 33242.0 |
| alpha/beta hydrolase | SHEW_RS14180 | Not Available | Negative | 3242973 - 3243902 | 33821.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
