Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e protease regulator rsep | SHEW_RS13600 | Not Available | Negative | 3102857 - 3104218 | 49405.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SHEW_RS13605 | Not Available | Negative | 3104289 - 3105476 | 42410.5 |
| phosphatidate cytidylyltransferase | SHEW_RS13610 | Not Available | Negative | 3105479 - 3106336 | 31116.3 |
| isoprenyl transferase | SHEW_RS13615 | Not Available | Negative | 3106357 - 3107148 | 29254.1 |
| ribosome recycling factor | SHEW_RS13620 | Not Available | Negative | 3107230 - 3107787 | 20652.9 |
| ump kinase | SHEW_RS13625 | Not Available | Negative | 3107823 - 3108566 | 26754.8 |
| translation elongation factor ts | SHEW_RS13630 | Not Available | Negative | 3108700 - 3109548 | 30213.2 |
| 30s ribosomal protein s2 | SHEW_RS13635 | Not Available | Negative | 3109668 - 3110396 | 26606.0 |
| type i methionyl aminopeptidase | SHEW_RS13640 | Not Available | Positive | 3110631 - 3111473 | 31360.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | SHEW_RS13645 | Not Available | Positive | 3111555 - 3114128 | 97468.4 |
Pathways
1313 pathways
Health Effects
No health effects information available for this bacterium.
