Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | SHEW_RS13550 | Not Available | Positive | 3089489 - 3090376 | 33137.7 |
| trna lysidine(34) synthetase tils | SHEW_RS13555 | Not Available | Negative | 3090549 - 3091865 | 48483.1 |
| dna polymerase iii subunit alpha | SHEW_RS13560 | Not Available | Negative | 3091974 - 3095447 | 129566.0 |
| ribonuclease hii | SHEW_RS13565 | Not Available | Negative | 3095620 - 3096246 | 22762.3 |
| lipid-a-disaccharide synthase | SHEW_RS13570 | Not Available | Negative | 3096246 - 3097394 | 42106.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | SHEW_RS13575 | Not Available | Negative | 3097490 - 3098257 | 27660.2 |
| 3-hydroxyacyl-acp dehydratase fabz | SHEW_RS13580 | Not Available | Negative | 3098254 - 3098715 | 17215.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | SHEW_RS13585 | Not Available | Negative | 3098746 - 3099771 | 35765.4 |
| omph family outer membrane protein | SHEW_RS13590 | Not Available | Negative | 3099778 - 3100272 | 18452.7 |
| outer membrane protein assembly factor bama | SHEW_RS13595 | Not Available | Negative | 3100342 - 3102825 | 92726.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
