Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | SHEW_RS13400 | Not Available | Positive | 3055273 - 3056010 | 27428.2 |
| acyltransferase | SHEW_RS13405 | Not Available | Positive | 3056013 - 3056642 | 22929.8 |
| hypothetical protein | SHEW_RS13410 | Not Available | Negative | 3056652 - 3056885 | 8063.67 |
| m28 family metallopeptidase | SHEW_RS13415 | Not Available | Positive | 3057319 - 3058905 | 58447.0 |
| amp-binding protein | SHEW_RS13420 | Not Available | Positive | 3059120 - 3060844 | 64089.1 |
| hypothetical protein | SHEW_RS13425 | Not Available | Negative | 3060953 - 3061225 | 9934.96 |
| hypothetical protein | SHEW_RS13430 | Not Available | Negative | 3061373 - 3061678 | 11217.8 |
| proline--trna ligase | SHEW_RS13435 | Not Available | Positive | 3062187 - 3063896 | 63086.9 |
| hypothetical protein | SHEW_RS13440 | Not Available | Negative | 3064009 - 3064725 | 27529.8 |
| yybh family protein | SHEW_RS13445 | Not Available | Negative | 3065072 - 3065500 | 15703.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
