Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s5-alanine n-acetyltransferase | SHEW_RS01290 | Not Available | Positive | 267039 - 267596 | 21363.7 |
| gnat family n-acetyltransferase | SHEW_RS01295 | Not Available | Negative | 268052 - 268594 | 19790.6 |
| merr family transcriptional regulator | SHEW_RS01300 | Not Available | Negative | 268605 - 269783 | 44793.8 |
| tyrosine-type recombinase/integrase | SHEW_RS01305 | Not Available | Positive | 270161 - 270757 | 22806.6 |
| duf2955 domain-containing protein | SHEW_RS01310 | Not Available | Negative | 270902 - 271894 | 36814.4 |
| hlyd family secretion protein | SHEW_RS01315 | Not Available | Negative | 271884 - 272990 | 39985.2 |
| hypothetical protein | SHEW_RS01320 | Not Available | Negative | 273010 - 273504 | 17828.1 |
| potassium channel family protein | SHEW_RS01325 | Not Available | Positive | 273651 - 274331 | 25307.6 |
| ysc84-related protein | SHEW_RS01330 | Not Available | Negative | 274860 - 275438 | 19598.2 |
| alpha/beta hydrolase family protein | SHEW_RS01335 | Not Available | Negative | 275574 - 277652 | 77319.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
