Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase | SHEW_RS13250 | Not Available | Negative | 3016221 - 3016757 | 19853.5 |
| duf3612 domain-containing protein | SHEW_RS13255 | Not Available | Positive | 3016939 - 3018471 | 56430.8 |
| nadp-dependent phosphogluconate dehydrogenase | SHEW_RS13260 | Not Available | Negative | 3018550 - 3020091 | 56012.0 |
| marr family winged helix-turn-helix transcriptional regulator | SHEW_RS13265 | Not Available | Negative | 3020357 - 3020827 | 17444.1 |
| nadp-dependent oxidoreductase | SHEW_RS13270 | Not Available | Positive | 3021146 - 3022141 | 35781.2 |
| mipa/ompv family protein | SHEW_RS13275 | Not Available | Positive | 3022340 - 3023152 | 30439.0 |
| duf3185 family protein | SHEW_RS13280 | Not Available | Negative | 3023374 - 3023565 | 6740.44 |
| hypothetical protein | SHEW_RS13285 | Not Available | Negative | 3023766 - 3024239 | 17807.2 |
| toxin-antitoxin system ywqk family antitoxin | SHEW_RS13290 | Not Available | Negative | 3024276 - 3025259 | 37329.5 |
| propionyl-coa synthetase | SHEW_RS13295 | Not Available | Negative | 3025644 - 3027548 | 69309.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
