Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family protein | SHEW_RS13150 | Not Available | Positive | 2997531 - 2997842 | 12052.5 |
| helix-turn-helix transcriptional regulator | SHEW_RS13155 | Not Available | Negative | 2997867 - 2998553 | 26393.0 |
| gyri-like domain-containing protein | SHEW_RS13160 | Not Available | Negative | 2998654 - 2999112 | 17093.2 |
| voc family protein | SHEW_RS13165 | Not Available | Negative | 2999246 - 2999665 | 15280.6 |
| phospho-sugar mutase | SHEW_RS13170 | Not Available | Negative | 2999834 - 3001588 | 63141.4 |
| ggdef domain-containing protein | SHEW_RS13175 | Not Available | Negative | 3001822 - 3002727 | 33893.5 |
| substrate-binding periplasmic protein | SHEW_RS13180 | Not Available | Negative | 3002815 - 3003621 | 31211.5 |
| rlua family pseudouridine synthase | SHEW_RS13185 | Not Available | Positive | 3003986 - 3004849 | 32136.8 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | SHEW_RS13190 | Not Available | Negative | 3004857 - 3006845 | 72538.3 |
| nad(p)h-dependent oxidoreductase | SHEW_RS13195 | Not Available | Negative | 3006851 - 3007468 | 23164.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
