Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | SHEW_RS13100 | Not Available | Positive | 2986836 - 2987738 | 33828.7 |
| hypothetical protein | SHEW_RS13105 | Not Available | Positive | 2988215 - 2988463 | 9462.81 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | SHEW_RS13110 | Not Available | Positive | 2988971 - 2989774 | 29318.1 |
| gntp family permease | SHEW_RS13115 | Not Available | Positive | 2990037 - 2991395 | 46759.6 |
| glycerate kinase | SHEW_RS13120 | Not Available | Positive | 2991493 - 2992638 | 39524.8 |
| pyridoxal-dependent aspartate 1-decarboxylase panp | SHEW_RS13125 | Not Available | Positive | 2992865 - 2994505 | 60150.7 |
| thiol-disulfide oxidoreductase dcc family protein | SHEW_RS13130 | Not Available | Negative | 2994546 - 2995016 | 17950.7 |
| helix-turn-helix transcriptional regulator | SHEW_RS13135 | Not Available | Positive | 2995324 - 2996262 | 34780.4 |
| azlc family abc transporter permease | SHEW_RS13140 | Not Available | Positive | 2996479 - 2997216 | 25711.2 |
| azld domain-containing protein | SHEW_RS13145 | Not Available | Positive | 2997216 - 2997518 | 11271.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
