Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | SHEW_RS13000 | Not Available | Negative | 2954783 - 2956162 | 52089.4 |
| peptidylprolyl isomerase | SHEW_RS13005 | Not Available | Positive | 2956427 - 2956921 | 17886.2 |
| udp-2,3-diacylglucosamine diphosphatase | SHEW_RS13010 | Not Available | Positive | 2956940 - 2957668 | 27831.2 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | SHEW_RS13015 | Not Available | Negative | 2957742 - 2958512 | 29127.0 |
| yip1 family protein | SHEW_RS13020 | Not Available | Positive | 2958763 - 2959359 | 21878.4 |
| glutamine--trna ligase | SHEW_RS13025 | Not Available | Negative | 2959443 - 2961113 | 64260.9 |
| fe(2+) transporter permease subunit feob | SHEW_RS13030 | Not Available | Negative | 2961319 - 2963613 | 81534.5 |
| feoa family protein | SHEW_RS13035 | Not Available | Negative | 2963606 - 2963845 | 8408.58 |
| dmse family decaheme c-type cytochrome | SHEW_RS13040 | Not Available | Positive | 2964239 - 2965207 | 35211.5 |
| mtrb/piob family decaheme-associated outer membrane protein | SHEW_RS13045 | Not Available | Positive | 2965223 - 2967334 | 78800.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
