Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal replication protein | SHEW_RS12855 | Not Available | Positive | 2925250 - 2925912 | 25385.5 |
| duf2057 domain-containing protein | SHEW_RS12860 | Not Available | Positive | 2925922 - 2926611 | 24582.1 |
| histone deacetylase | SHEW_RS12865 | Not Available | Positive | 2926619 - 2927521 | 33410.9 |
| late competence development comfb family protein | SHEW_RS12870 | Not Available | Positive | 2927573 - 2927851 | 11056.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2928143 - 2928240 | Not Available |
| comea family dna-binding protein | SHEW_RS12875 | Not Available | Negative | 2928413 - 2928712 | 10423.6 |
| slc13 family permease | SHEW_RS12880 | Not Available | Positive | 2929103 - 2930494 | 49492.3 |
| methionine gamma-lyase | SHEW_RS12885 | Not Available | Negative | 2930577 - 2931752 | 42078.7 |
| tigr01620 family protein | SHEW_RS12890 | Not Available | Negative | 2931878 - 2932972 | 40763.4 |
| ycjx family protein | SHEW_RS12895 | Not Available | Negative | 2933058 - 2934500 | 53924.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
