Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | SHEW_RS12700 | Not Available | Negative | 2884964 - 2886220 | 46531.9 |
| aaa family atpase | SHEW_RS12705 | Not Available | Negative | 2886466 - 2889522 | 111735.0 |
| exonuclease sbccd subunit d | SHEW_RS12710 | Not Available | Negative | 2889519 - 2890661 | 41681.8 |
| glutathione-dependent disulfide-bond oxidoreductase | SHEW_RS12715 | Not Available | Negative | 2890901 - 2891761 | 31918.6 |
| hypothetical protein | SHEW_RS12720 | Not Available | Negative | 2892005 - 2892352 | 12684.1 |
| toxin-antitoxin system ywqk family antitoxin | SHEW_RS12725 | Not Available | Negative | 2892459 - 2893502 | 39936.9 |
| toxin-antitoxin system ywqk family antitoxin | SHEW_RS12730 | Not Available | Negative | 2893613 - 2895931 | 88565.8 |
| toxin-antitoxin system ywqk family antitoxin | SHEW_RS12735 | Not Available | Negative | 2896062 - 2897870 | 69732.5 |
| hypothetical protein | SHEW_RS12740 | Not Available | Negative | 2897880 - 2900201 | 86267.9 |
| tsup family transporter | SHEW_RS12750 | Not Available | Negative | 2900369 - 2901133 | 26504.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
