Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/proline symporter putp | SHEW_RS12600 | Not Available | Positive | 2862004 - 2863455 | 52112.3 |
| ompp1/fadl family transporter | SHEW_RS12605 | Not Available | Positive | 2863837 - 2865153 | 47029.2 |
| voc family protein | SHEW_RS12610 | Not Available | Positive | 2865259 - 2865645 | 14393.9 |
| simpl domain-containing protein | SHEW_RS12615 | Not Available | Positive | 2865720 - 2866430 | 26292.4 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS12620 | Not Available | Positive | 2866545 - 2867561 | 36624.7 |
| efflux rnd transporter permease subunit | SHEW_RS12625 | Not Available | Positive | 2867592 - 2870846 | 118089.0 |
| duf2892 domain-containing protein | SHEW_RS12630 | Not Available | Positive | 2870858 - 2871070 | 7813.94 |
| rhodanese-like domain-containing protein | SHEW_RS12635 | Not Available | Positive | 2871163 - 2871477 | 11458.4 |
| s8 family serine peptidase | SHEW_RS12640 | Not Available | Positive | 2872126 - 2874537 | 83288.9 |
| vf530 family dna-binding protein | SHEW_RS12645 | Not Available | Positive | 2874637 - 2874987 | 13143.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
