Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid oxidation complex subunit alpha fadj | SHEW_RS12550 | Not Available | Negative | 2849329 - 2851449 | 75983.8 |
| acetyl-coa c-acyltransferase fadi | SHEW_RS12555 | Not Available | Negative | 2851454 - 2852764 | 46846.5 |
| aaa family atpase | SHEW_RS12560 | Not Available | Positive | 2853173 - 2854129 | 35481.7 |
| duf58 domain-containing protein | SHEW_RS12565 | Not Available | Positive | 2854129 - 2855058 | 34538.9 |
| duf4381 domain-containing protein | SHEW_RS12570 | Not Available | Positive | 2855059 - 2855553 | 17912.2 |
| vwa domain-containing protein | SHEW_RS12575 | Not Available | Positive | 2855541 - 2856560 | 37577.7 |
| vwa domain-containing protein | SHEW_RS12580 | Not Available | Positive | 2856557 - 2858638 | 75635.9 |
| batd family protein | SHEW_RS12585 | Not Available | Positive | 2858632 - 2860272 | 59431.8 |
| sigma-70 family rna polymerase sigma factor | SHEW_RS12590 | Not Available | Positive | 2860357 - 2860920 | 22063.3 |
| duf3379 domain-containing protein | SHEW_RS12595 | Not Available | Positive | 2860913 - 2861617 | 26654.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
