Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-nad kinase family protein | SHEW_RS12500 | Not Available | Negative | 2833865 - 2835031 | 40563.2 |
| mfs transporter | SHEW_RS12505 | Not Available | Negative | 2835052 - 2836215 | 42328.6 |
| chorismate synthase | SHEW_RS12510 | Not Available | Negative | 2836447 - 2837541 | 39172.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | SHEW_RS12515 | Not Available | Negative | 2837673 - 2838617 | 35379.9 |
| endonuclease smrb | SHEW_RS12520 | Not Available | Positive | 2838697 - 2839224 | 19864.9 |
| phosphohistidine phosphatase sixa | SHEW_RS12525 | Not Available | Negative | 2839398 - 2839868 | 17711.2 |
| insulinase family protein | SHEW_RS12530 | Not Available | Positive | 2840080 - 2842869 | 107108.0 |
| eal domain-containing protein | SHEW_RS12535 | Not Available | Positive | 2843466 - 2847746 | 160869.0 |
| hypothetical protein | SHEW_RS12540 | Not Available | Positive | 2847897 - 2848532 | 23205.5 |
| hypothetical protein | SHEW_RS12545 | Not Available | Negative | 2848964 - 2849164 | 7227.34 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
