Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parallel beta-helix domain-containing protein | SHEW_RS12450 | Not Available | Positive | 2819657 - 2822308 | 95033.1 |
| so2930 family diheme c-type cytochrome | SHEW_RS12455 | Not Available | Positive | 2822361 - 2823596 | 44765.6 |
| helix-turn-helix transcriptional regulator | SHEW_RS12460 | Not Available | Negative | 2823593 - 2824606 | 38020.7 |
| protease sohb | SHEW_RS12465 | Not Available | Negative | 2824745 - 2825776 | 37520.3 |
| vola/pla-1 family phospholipase | SHEW_RS12470 | Not Available | Negative | 2825905 - 2828391 | 84753.5 |
| ycik family oxidoreductase | SHEW_RS12475 | Not Available | Positive | 2828652 - 2829389 | 26554.9 |
| beta-ketoacyl-acp synthase i | SHEW_RS12480 | Not Available | Negative | 2829576 - 2830787 | 42910.1 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | SHEW_RS12485 | Not Available | Positive | 2830963 - 2832951 | 72630.0 |
| rna methyltransferase | SHEW_RS12490 | Not Available | Negative | 2833034 - 2833558 | 18816.4 |
| yfcl family protein | SHEW_RS12495 | Not Available | Negative | 2833561 - 2833842 | 10185.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
