Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 2754864 - 2754939 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2755054 - 2755130 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2755335 - 2756879 | Not Available |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | SHEW_RS12215 | Not Available | Negative | 2757544 - 2758098 | 20380.2 |
| aminopeptidase p n-terminal domain-containing protein | SHEW_RS12220 | Not Available | Positive | 2758272 - 2759591 | 48841.0 |
| uracil-dna glycosylase family protein | SHEW_RS12225 | Not Available | Negative | 2759661 - 2760251 | 21710.4 |
| nad(p)/fad-dependent oxidoreductase | SHEW_RS12230 | Not Available | Negative | 2760413 - 2761735 | 47960.2 |
| proline racemase family protein | SHEW_RS12235 | Not Available | Negative | 2761750 - 2762790 | 37613.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SHEW_RS12240 | Not Available | Positive | 2762994 - 2763908 | 33928.9 |
| 4-hydroxyproline epimerase | SHEW_RS12245 | Not Available | Positive | 2763929 - 2764930 | 36114.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
