Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp phosphodiesterase | SHEW_RS12100 | Not Available | Positive | 2733316 - 2733909 | 22619.1 |
| protein disulfide oxidoreductase | SHEW_RS12105 | Not Available | Positive | 2733979 - 2734476 | 18563.6 |
| sigma-54-dependent transcriptional regulator | SHEW_RS12110 | Not Available | Negative | 2734555 - 2735907 | 50440.9 |
| sensor histidine kinase | SHEW_RS12115 | Not Available | Negative | 2735907 - 2737541 | 60038.4 |
| hypothetical protein | SHEW_RS20145 | Not Available | Positive | 2737879 - 2738655 | 29575.1 |
| hypothetical protein | SHEW_RS12125 | Not Available | Positive | 2738752 - 2739087 | 12737.4 |
| phne/ptxc family abc transporter permease | SHEW_RS12130 | Not Available | Negative | 2739163 - 2740677 | 56384.7 |
| atp-binding cassette domain-containing protein | SHEW_RS12135 | Not Available | Negative | 2740733 - 2741398 | 24345.4 |
| putative selenate abc transporter substrate-binding protein | SHEW_RS12140 | Not Available | Negative | 2741403 - 2742257 | 31488.2 |
| response regulator | SHEW_RS12145 | Not Available | Positive | 2742497 - 2743171 | 25074.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
