Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | SHEW_RS12005 | Not Available | Negative | 2715297 - 2716055 | 27369.9 |
| inositol-1-monophosphatase | SHEW_RS12010 | Not Available | Positive | 2716213 - 2717016 | 29084.6 |
| nnrs family protein | SHEW_RS12015 | Not Available | Positive | 2717361 - 2718533 | 42521.8 |
| phosphate-starvation-inducible protein psie | SHEW_RS12020 | Not Available | Positive | 2718642 - 2719046 | 14982.0 |
| pilz domain-containing protein | SHEW_RS12025 | Not Available | Positive | 2719363 - 2719665 | 11485.7 |
| aaa family atpase | SHEW_RS12030 | Not Available | Positive | 2719779 - 2720447 | 24508.6 |
| hypothetical protein | SHEW_RS12035 | Not Available | Positive | 2720434 - 2720778 | 13032.8 |
| yech family metal-binding protein | SHEW_RS12040 | Not Available | Negative | 2720811 - 2721053 | 8895.61 |
| sensor histidine kinase | SHEW_RS12045 | Not Available | Positive | 2721211 - 2722908 | 62089.4 |
| two-component system response regulator btsr | SHEW_RS12050 | Not Available | Positive | 2722905 - 2723615 | 26652.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
