Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | SHEW_RS01145 | Not Available | Positive | 233648 - 234322 | 24359.4 |
| phosphoglycolate phosphatase | SHEW_RS01150 | Not Available | Positive | 234325 - 235020 | 25000.9 |
| tryptophan--trna ligase | SHEW_RS01155 | Not Available | Positive | 235026 - 236024 | 36906.7 |
| lysr substrate-binding domain-containing protein | SHEW_RS01160 | Not Available | Negative | 236089 - 236964 | 33334.2 |
| dmt family transporter | SHEW_RS01165 | Not Available | Positive | 237090 - 237959 | 31807.5 |
| division/outer membrane stress-associated lipid-binding lipoprotein | SHEW_RS01170 | Not Available | Negative | 237981 - 238550 | 20321.7 |
| phosphoheptose isomerase | SHEW_RS01175 | Not Available | Negative | 238547 - 239140 | 20975.1 |
| yran family protein | SHEW_RS01180 | Not Available | Negative | 239209 - 239553 | 13154.8 |
| penicillin-binding protein activator | SHEW_RS01185 | Not Available | Negative | 239550 - 241454 | 70102.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SHEW_RS01190 | Not Available | Positive | 241543 - 242385 | 30165.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
