Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | SHEW_RS11400 | Not Available | Positive | 2559814 - 2560896 | 39238.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | SHEW_RS11405 | Not Available | Positive | 2560964 - 2562031 | 39184.8 |
| imidazole glycerol phosphate synthase subunit hish | SHEW_RS11410 | Not Available | Positive | 2562028 - 2562702 | 23972.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | SHEW_RS11415 | Not Available | Positive | 2562699 - 2563436 | 26301.4 |
| imidazole glycerol phosphate synthase subunit hisf | SHEW_RS11420 | Not Available | Positive | 2563418 - 2564191 | 28374.9 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | SHEW_RS11425 | Not Available | Positive | 2564220 - 2564840 | 22898.0 |
| ggdef domain-containing protein | SHEW_RS11430 | Not Available | Positive | 2565329 - 2566408 | 40240.3 |
| response regulator transcription factor | SHEW_RS11435 | Not Available | Positive | 2566806 - 2567546 | 27690.1 |
| tetratricopeptide repeat protein | SHEW_RS20135 | Not Available | Positive | 2567553 - 2569835 | 85281.2 |
| s8 family serine peptidase | SHEW_RS11445 | Not Available | Positive | 2570346 - 2572163 | 62610.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
