Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln domain-containing protein | SHEW_RS01095 | Not Available | Positive | 224781 - 225362 | 22155.0 |
| type 4a pilus biogenesis protein pilo | SHEW_RS01100 | Not Available | Positive | 225359 - 225982 | 23478.4 |
| pilus assembly protein pilp | SHEW_RS01105 | Not Available | Positive | 225979 - 226494 | 19325.5 |
| type iv pilus secretin pilq | SHEW_RS01110 | Not Available | Positive | 226517 - 228568 | 74878.4 |
| shikimate kinase arok | SHEW_RS01115 | Not Available | Positive | 228784 - 229299 | 19224.9 |
| 3-dehydroquinate synthase | SHEW_RS01120 | Not Available | Positive | 229315 - 230391 | 38856.1 |
| aaa family atpase | SHEW_RS01125 | Not Available | Positive | 230408 - 231943 | 56273.0 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | SHEW_RS01130 | Not Available | Positive | 231996 - 232835 | 31976.8 |
| duf2970 domain-containing protein | SHEW_RS20225 | Not Available | Negative | 232910 - 233083 | 6308.08 |
| hypothetical protein | SHEW_RS01140 | Not Available | Negative | 233092 - 233436 | 12378.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
