Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS11300 | Not Available | Negative | 2538800 - 2539717 | 34171.9 |
| duf6932 family protein | SHEW_RS11305 | Not Available | Negative | 2539707 - 2540279 | 21444.4 |
| ycgn family cysteine cluster protein | SHEW_RS11310 | Not Available | Negative | 2541432 - 2541872 | 16979.2 |
| lytic transglycosylase domain-containing protein | SHEW_RS11315 | Not Available | Negative | 2541987 - 2542925 | 34822.9 |
| ycgl domain-containing protein | SHEW_RS11320 | Not Available | Negative | 2543261 - 2543542 | 10918.5 |
| septum site-determining protein minc | SHEW_RS11325 | Not Available | Positive | 2543669 - 2544334 | 23119.9 |
| septum site-determining protein mind | SHEW_RS11330 | Not Available | Positive | 2544359 - 2545168 | 28998.0 |
| cell division topological specificity factor mine | SHEW_RS11335 | Not Available | Positive | 2545171 - 2545431 | 9916.8 |
| ribonuclease d | SHEW_RS11340 | Not Available | Negative | 2545541 - 2546647 | 41860.6 |
| long-chain-fatty-acid--coa ligase fadd | SHEW_RS11345 | Not Available | Negative | 2546738 - 2548411 | 61721.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
