Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | SHEW_RS11110 | Not Available | Negative | 2486164 - 2487036 | 32472.8 |
| lytic murein transglycosylase | SHEW_RS11115 | Not Available | Negative | 2487318 - 2488505 | 43585.9 |
| duf2750 domain-containing protein | SHEW_RS11120 | Not Available | Positive | 2488761 - 2489135 | 14215.4 |
| hypothetical protein | SHEW_RS11125 | Not Available | Positive | 2489193 - 2489876 | 25423.3 |
| chemotaxis protein chev | SHEW_RS11130 | Not Available | Negative | 2489931 - 2490884 | 35389.1 |
| mechanosensitive ion channel family protein | SHEW_RS11135 | Not Available | Negative | 2490993 - 2492606 | 59998.2 |
| hypothetical protein | SHEW_RS20595 | Not Available | Positive | 2493096 - 2493269 | 6424.68 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | SHEW_RS11140 | Not Available | Negative | 2493419 - 2494345 | 34732.6 |
| yccf domain-containing protein | SHEW_RS11145 | Not Available | Positive | 2494575 - 2494982 | 14696.7 |
| substrate-binding periplasmic protein | SHEW_RS11150 | Not Available | Negative | 2495069 - 2495770 | 26422.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
