Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SHEW_RS11010 | Not Available | Positive | 2456566 - 2457546 | 36118.4 |
| diguanylate cyclase | SHEW_RS11015 | Not Available | Positive | 2457561 - 2458919 | 50921.9 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | SHEW_RS11020 | Not Available | Negative | 2458916 - 2459533 | 23499.1 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | SHEW_RS11025 | Not Available | Negative | 2459572 - 2460597 | 37978.7 |
| dna recombination protein rmuc | SHEW_RS11030 | Not Available | Positive | 2460779 - 2462254 | 56170.4 |
| transglycosylase slt domain-containing protein | SHEW_RS11035 | Not Available | Positive | 2462346 - 2464283 | 73369.8 |
| aaa family atpase | SHEW_RS11040 | Not Available | Positive | 2464627 - 2465538 | 33152.2 |
| duf58 domain-containing protein | SHEW_RS11045 | Not Available | Positive | 2465566 - 2466561 | 37034.8 |
| transglutaminasetgpa domain-containing protein | SHEW_RS11050 | Not Available | Positive | 2466551 - 2468593 | 76916.8 |
| exodeoxyribonuclease v subunit gamma | SHEW_RS11055 | Not Available | Positive | 2468812 - 2472390 | 134969.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
