Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03503 family protein | SHEW_RS10960 | Not Available | Negative | 2445616 - 2446938 | 48514.6 |
| dna polymerase iii subunit epsilon | SHEW_RS10965 | Not Available | Negative | 2446949 - 2447677 | 26843.1 |
| ribonuclease hi | SHEW_RS10970 | Not Available | Positive | 2447746 - 2448222 | 17516.1 |
| methyltransferase domain-containing protein | SHEW_RS10975 | Not Available | Negative | 2448267 - 2448989 | 27300.4 |
| hydroxyacylglutathione hydrolase | SHEW_RS10980 | Not Available | Positive | 2449127 - 2449909 | 28741.7 |
| lysm peptidoglycan-binding domain-containing protein | SHEW_RS10985 | Not Available | Positive | 2450005 - 2451540 | 57031.9 |
| asma family protein | SHEW_RS10990 | Not Available | Negative | 2451758 - 2453602 | 65843.3 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SHEW_RS10995 | Not Available | Negative | 2453640 - 2454134 | 17898.6 |
| hypothetical protein | SHEW_RS11000 | Not Available | Positive | 2454344 - 2454658 | 12152.4 |
| methyl-accepting chemotaxis protein | SHEW_RS11005 | Not Available | Negative | 2454694 - 2456340 | 58868.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
